Scenarios 1&2 are non-reproducible. The correct workflow for scenario 3 is to set the layerQueries on create replica to all rows e.g. layerQueries = {"0":{"queryOption": "all", "useGeometry": false}, "1":{"queryOption": "all", "useGeometry": false}….. } ref https://developers.arcgis.com/rest/services-reference/create-replica.htm